Docker Images tracking the stable Galaxy releases
| Name | Description |
|---|---|
ENABLE_TTS_INSTALL
|
Enables the Test Tool Shed during container startup. This change is not persistent. (
ENABLE_TTS_INSTALL=True
)
|
GALAXY_LOGGING
|
Enables for verbose logging at Docker stdout. (
GALAXY_LOGGING=full
)
|
BARE
|
Disables all default Galaxy tools. (
BARE=True
)
|
NONUSE
|
Disable services during container startup. (
NONUSE=cron,proftp,reports,nodejs,condor,slurmd,slurmctld,celery,rabbitmq,redis,flower,tusd
)
|
GUNICORN_WORKERS
|
Set the number of gunicorn workers (
GUNICORN_WORKERS=2
)
|
CELERY_WORKERS
|
Set the number of celery workers (
CELERY_WORKERS=2
)
|
GALAXY_DOCKER_ENABLED
|
Enable Galaxy to use Docker containers if annotated in tools (
GALAXY_DOCKER_ENABLED=False
)
|
GALAXY_DOCKER_VOLUMES
|
Specify volumes that should be mounted into tool containers (
GALAXY_DOCKER_VOLUMES=""
)
|
GALAXY_HANDLER_NUMPROCS
|
Set the number of Galaxy handler (
GALAXY_HANDLER_NUMPROCS=2
)
|
LOAD_GALAXY_CONDITIONAL_DEPENDENCIES
|
Installing optional dependencies into the Galaxy virtual environment |
LOAD_PYTHON_DEV_DEPENDENCIES
|
Installation of Galaxy's dev dependencies. Needs
LOAD_GALAXY_CONDITIONAL_DEPENDENCIES
as well
|
GALAXY_AUTO_UPDATE_DB
|
Run the Galaxy database migration script during startup |